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Differential Amplification, Assembly, and Relocation of Multiple DNA Sequences in Human Neuroblastomas and Neuroblastoma Cell Lines
Yosef Shiloh, Janet Shipley, Garrett M. Brodeur, Gail Bruns, Bruce Korf, Tim Donlon, Rhona R. Schreck, Robert Seeger, Kazuo Sakai and Samuel A. Lati
Proceedings of the National Academy of Sciences of the United States of America
Vol. 82, No. 11 (Jun. 1, 1985), pp. 3761-3765
Published by: National Academy of Sciences
Stable URL: http://www.jstor.org/stable/25749
Page Count: 5
You can always find the topics here!Topics: DNA probes, Tumors, Cell lines, Neuroblastoma, Chromosomes, DNA, Hybridity, Tumor cell line, Neurons, Somatic cells
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DNA amplification, manifested by homogeneously staining regions in chromosomes and by extrachromosomal, double minute bodies, is characteristic of many neuroblastoma cell lines. Sequences recruited from a specific domain on the short arm of chromosome 2 (2p) are amplified in advanced-stage primary neuroblastomas, whereas sequences from distinctly different regions of 2p are amplified in the neuroblastoma cell line IMR-32. Five different DNA segments, which include the oncogene N-myc, three other fragments derived from the homogeneously staining region of the neuroblastoma cell line IMR-32, and a fifth fragment, derived from the neuroblastoma cell line NB-9, showed differential and variable amplification in 24 advanced-stage neuroblastoma tumors out of 112 tested specimens. All five fragments were mapped within the chromosomal region 2p23-2p25 by three different approaches. However, eight other fragments cloned from the homogeneously staining region of IMR-32 cells, which were not amplified in the tumor tissues examined, were mapped to two more proximal domains of 2p, thousands of kilobases apart from each other and from the chromosomal domain that is amplified in the tumors. These results establish the amplification, to different degrees, of a variable-sized segment of one domain near the terminus of 2p in advanced neuroblastomas. These tumors might ultimately be distinguished according to the pattern of amplification of DNA segments within this domain. The data presented also indicate the existence of a new and complex amplification mechanism in at least one neuroblastoma cell line (IMR-32), which involves not only relocation of DNA from specific genomic domains but also the formation of novel units by splicing together very distant DNA segments.
Proceedings of the National Academy of Sciences of the United States of America © 1985 National Academy of Sciences