Access

You are not currently logged in.

Access your personal account or get JSTOR access through your library or other institution:

login

Log in to your personal account or through your institution.

If You Use a Screen Reader

This content is available through Read Online (Free) program, which relies on page scans. Since scans are not currently available to screen readers, please contact JSTOR User Support for access. We'll provide a PDF copy for your screen reader.

Epigenetic stability, adaptability, and reversibility in human embryonic stem cells

Joshua D. Tompkins, Christine Hall, Vincent Chang-yi Chen, Arthur Xuejun Li, Xiwei Wu, David Hsu, Larry A. Couture and Arthur D. Riggs
Proceedings of the National Academy of Sciences of the United States of America
Vol. 109, No. 31 (July 31, 2012), pp. 12544-12549
Stable URL: http://www.jstor.org/stable/41685435
Page Count: 6
  • Read Online (Free)
  • Subscribe ($19.50)
  • Cite this Item
Since scans are not currently available to screen readers, please contact JSTOR User Support for access. We'll provide a PDF copy for your screen reader.
Epigenetic stability, adaptability, and reversibility in human embryonic stem cells
Preview not available

Abstract

The stability of human embryonic stem cells (hESCs) is of critical importance for both experimental and clinical applications. We find that as an initial response to altered culture conditions, hESCs change their transcription profile for hundreds of genes and their DNA methylation profiles for several genes outside the core pluripotency network. After adaption to conditions of feeder-free defined and/or xeno-free culture systems, expression and DNA methylation profiles are quite stable for additional passaging. However, upon reversion to the original feeder-based culture conditions, numerous transcription changes are not reversible. Similarly, although the majority of DNA methylation changes are reversible, highlighting the plasticity of DNA methylation, a few are persistent. Collectively, this indicates these cells harbor a memory of culture history. For culture-induced DNA methylation changes, we also note an intriguing correlation: hypomethylation of regions 500-2440 bp upstream of promoters correlates with decreased expression, opposite to that commonly seen at promoter-proximal regions. Lastly, changes in regulation of G-coupled protein receptor pathways provide a partial explanation for many of the unique transcriptional changes observed during hESC adaptation and reverse adaptation.

Page Thumbnails

  • Thumbnail: Page 
[12544]
    [12544]
  • Thumbnail: Page 
12545
    12545
  • Thumbnail: Page 
12546
    12546
  • Thumbnail: Page 
12547
    12547
  • Thumbnail: Page 
12548
    12548
  • Thumbnail: Page 
12549
    12549